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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015865642.1_cds_XP_016432451.1_28697
CDS Infomation

[gene=LOC107759094] [db_xref=GeneID:107759094] [protein=serine hydroxymethyltransferase 3, chloroplastic-like] [protein_id=XP_016432451.1] [location=complement(join(48656..48930,49008..49080,49326..49433,49518..49604,49771..49875,50523..50645,50738..50850,50937..51054,51143..51317,51418..51613,52710..52914))] [gbkey=CDS]
Sequence

ATGGAAGCTTGTTGCGGAGCTGCAATCATGGGTTCTGTTCAGCAGCCTGTTTGGGTTAAA
AGTTCAGCTTTTCCTTCAAAAGGGGCTACTGGTGGTATTAATGTAAATTTGAGTCGGGTT
AAATTATGCTCTGTAAAGCCCTGCAGAGCATCTCCAATTGAAGGGAGCTTGTTAACAGGA
AGCCCTACTTCTTCTGTTTCTGTAGGTGCTGAAAGCAGCTTTGAAGACTATGGATTGAGT
GAAGCTGATCCTGATGTTCGTGCTATAATTGACAAAGAGAAGAAACGTCAATTTAGGAGC
TTAGAACTTATTGCATCTGAGAATTTCACATCTCGGGCAGTGATGGAAGCAGTTGGTTCT
TGCCTTACAAACAAATATTCTGAAGGGCTTCCAGGCAAAAGATATTATGGTGGGAATGAA
TACATTGATGAGTTGGAAACTCTCTGTCAAGAAAGGGCATTGGCTGCCTTTAGTTTAGAT
GGAAAGCAATGGGGTGTAAACGTTCAACCATTATCTGGTTCACCAGCAAATTTCGCAGTT
TACACAGCGGTTCTTAATCCACACGACCGGATTATGGGATTGGACTTACCTCATGGTGGC
CACTTGTCCCATGGATTTATGACTCCTAAACGACGAGTTTCAGCCACCTCTATTTACTTT
GAGTCCATGCCTTATCGACTTGATGAATCTACAGGCATTCTCGATTATGAAATGCTTGAG
AAAACAGCGAATCTTTTTCGACCAAAACTTATTATTGCTGGTGCTAGTGCATATCCACGT
GATTTTGATTATCCTCGTCTGAGAAAGATAGCAGATGCTGTCGGAGCTTTCCTAATGATG
GATATGGCTCATATCAGCGGGCTTGTTGCTGCCTCTGTACTTGCTAATCCATTTGAATAC
AGTGACATTGTCACTACTACTACTCACAAGTCTCTTAGAGGTCCTAGAGGTGGAATGATC
TTCTTCAAAAAAGATCCAGTTCTGGGTGTGGATCTGGAATCTGCTATAAATAATGCTGTT
TTTCCTGGTTTGCAGGGTGGACCCCATAATCACACAATTGGAGGTCTAGCCGTTTGTTTG
AAACATGCCAAATCACCTGAATTTAAGGCTTATCAGAACCAGGTGGTCTCTAACTGTAGA
GCTCTTGCAAGCCGGTTAATGGAATTAGGCTACAAGCTGGTCTCAGGAGGGAGTGACAAT
CATTTGGTTCTTGTCGATTTGAGGCCTCTAGGAATTGATGGTGCTAGAGTGGAGAAAATA
CTTGACATGGCATCAATCACTCTCAATAAGAATTCAGTACCTGGTGATAAAAGTGCACTA
GTACCTGGTGGCATCCGCATAGGCTCACCGGCCATGACCACTCGAGGTTTTACAGAGAAG
GAATTTGTAGCAGTTGCAGATTTCATTCACGAGGGCGTTCAAATTACTCTTGAAGCCAAG
AAGTCTGTCTCTAGTACCAAACTCCAAGATTTCTTGAAGTTTGTTACTGCCCCAGATTTT
AATTTGATTGATAGGGTGTTGGACTTACAAAGAAGGGTCGAAGCTTTCACGAGCCAGTAC
CCATTGCCTGGTTTATGA

Peptide Sequence

PEP ID

XP_016432451.1
PEP Infomation

PREDICTED: serine hydroxymethyltransferase 3, chloroplastic-like [Nicotiana tabacum]
Sequence

MEACCGAAIMGSVQQPVWVKSSAFPSKGATGGINVNLSRVKLCSVKPCRASPIEGSLLTG
SPTSSVSVGAESSFEDYGLSEADPDVRAIIDKEKKRQFRSLELIASENFTSRAVMEAVGS
CLTNKYSEGLPGKRYYGGNEYIDELETLCQERALAAFSLDGKQWGVNVQPLSGSPANFAV
YTAVLNPHDRIMGLDLPHGGHLSHGFMTPKRRVSATSIYFESMPYRLDESTGILDYEMLE
KTANLFRPKLIIAGASAYPRDFDYPRLRKIADAVGAFLMMDMAHISGLVAASVLANPFEY
SDIVTTTTHKSLRGPRGGMIFFKKDPVLGVDLESAINNAVFPGLQGGPHNHTIGGLAVCL
KHAKSPEFKAYQNQVVSNCRALASRLMELGYKLVSGGSDNHLVLVDLRPLGIDGARVEKI
LDMASITLNKNSVPGDKSALVPGGIRIGSPAMTTRGFTEKEFVAVADFIHEGVQITLEAK
KSVSSTKLQDFLKFVTAPDFNLIDRVLDLQRRVEAFTSQYPLPGL

Transcript Sequence

Gene sequence data has not been registered.